From 4a767a80c38ed357771d82b4e05ee6b0c8948bff Mon Sep 17 00:00:00 2001 From: nirmaljb Date: Sun, 15 Feb 2026 00:52:15 +0530 Subject: [PATCH 1/4] feat: add c implementation of kernal betainc --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: passed - task: lint_repl_help status: na - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: passed - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: missing_dependencies - task: lint_c_examples status: missing_dependencies - task: lint_c_benchmarks status: missing_dependencies - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: passed - task: lint_license_headers status: passed --- --- .../base/special/kernel-betainc/README.md | 108 +- .../benchmark/benchmark.native.js | 67 ++ .../benchmark/c/native/Makefile | 146 +++ .../benchmark/c/native/benchmark.c | 139 +++ .../base/special/kernel-betainc/binding.gyp | 170 +++ .../kernel-betainc/docs/types/index.d.ts | 22 +- .../special/kernel-betainc/docs/types/test.ts | 16 +- .../kernel-betainc/examples/c/Makefile | 146 +++ .../kernel-betainc/examples/c/example.c | 44 + .../base/special/kernel-betainc/include.gypi | 53 + .../stdlib/math/base/special/kernel_betainc.h | 40 + .../base/special/kernel-betainc/lib/native.js | 56 + .../base/special/kernel-betainc/manifest.json | 173 +++ .../base/special/kernel-betainc/package.json | 3 + .../base/special/kernel-betainc/src/Makefile | 70 ++ .../base/special/kernel-betainc/src/addon.c | 39 + .../base/special/kernel-betainc/src/main.c | 1026 +++++++++++++++++ 17 files changed, 2299 insertions(+), 19 deletions(-) create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/benchmark.native.js create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/Makefile create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/benchmark.c create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/binding.gyp create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/Makefile create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/include.gypi create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/include/stdlib/math/base/special/kernel_betainc.h create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/manifest.json create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/Makefile create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/addon.c create mode 100644 lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/README.md b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/README.md index 6c530e62732e..e04fce9ef8b1 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/README.md +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/README.md @@ -18,7 +18,7 @@ limitations under the License. --> -# Kernel Betainc +# kernelBetainc > [Incomplete beta function][incomplete-beta-function] and its first derivative. @@ -135,6 +135,112 @@ for ( i = 0; i < 100; i++ ) { + + +* * * + +
+ +## C APIs + + + +
+ +
+ + + + + +
+ +### Usage + +```c +#include "stdlib/math/base/special/kernel_betainc.h" +``` + +#### stdlib_base_kernel_betainc( x, a, b, regularized, upper, &out, &derivative ) + +Evaluates the incomplete beta function and its first derivative. + +```c +double out; +double deriv; + +stdlib_base_kernel_betainc( 0.5, 2.0, 5.0, true, false, &out, &deriv ); +``` + +The function accepts the following arguments: + +- **x**: `[in] double` input value. +- **a**: `[in] double` input value. +- **b**: `[in] double` input value. +- **regularized**: `[in] bool` indicating if the function should evaluate the regularized incomplete beta function. +- **upper**: `[in] bool` indicating if the function should return the upper tail of the incomplete beta function. +- **out**: `[out] double*` pointer to store the function value. +- **derivative**: `[out] double*` pointer to store the first derivative. + +```c +void stdlib_base_kernel_betainc( double x, double a, double b, const bool regularized, bool upper, double *out, double *derivative ); +``` + +
+ + + + + +
+ +
+ + + + + +
+ +### Examples + +```c +#include "stdlib/math/base/special/kernel_betainc.h" +#include "stdlib/random/base/randu.h" +#include +#include +#include + +int main( void ) { + + double out; + double deriv; + double x; + double a; + double b; + int32_t i; + struct BasePRNGObject *obj = stdlib_base_random_randu_allocate( 0 ); + + for ( i = 0; i < 100; i++ ) { + x = stdlib_base_random_randu( obj ); + a = stdlib_base_random_randu( obj ) * 10.0; + b = stdlib_base_random_randu( obj ) * 10.0; + stdlib_base_kernel_betainc( x, a, b, true, false, &out, &deriv ); + printf( "x: %lf, \t a: %lf, \t b: %lf, \t f(x,a,b): %lf, \t f^1(x,a,b): %lf", x, a, b, out, deriv ); + } + + stdlib_base_random_randu_free( obj ); +} +``` + +
+ + + +
+ + +
diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/benchmark.native.js new file mode 100644 index 000000000000..623114e2760c --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/benchmark.native.js @@ -0,0 +1,67 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var resolve = require( 'path' ).resolve; +var bench = require( '@stdlib/bench' ); +var uniform = require( '@stdlib/random/array/uniform' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var tryRequire = require( '@stdlib/utils/try-require' ); +var EPS = require( '@stdlib/constants/float64/eps' ); +var pkg = require( './../package.json' ).name; + + +// VARIABLES // + +var kernelBetainc = tryRequire( resolve( __dirname, './../lib/native.js' ) ); +var opts = { + 'skip': ( kernelBetainc instanceof Error ) +}; + + +// MAIN // + +bench( pkg+'::regularized,upper', opts, function benchmark( assert ) { + var out; + var x; + var a; + var b; + var i; + + x = uniform( 100, 0.0, 1.0 ); + a = uniform( 100, EPS, 1000.0 ); + b = uniform( 100, EPS, 1000.0 ); + + out = [ 0.0, 0.0 ]; + assert.tic(); + for ( i = 0; i < assert.iterations; i++ ) { + out = kernelBetainc( x[ i%x.length ], a[ i%a.length ], b[ i%b.length ], true, true ); + if ( isnan( out[ 0 ] ) || isnan( out[ 1 ] ) ) { + assert.fail( 'should not return NaN' ); + } + } + assert.toc(); + if ( isnan( out[ 0 ] ) || isnan( out[ 1 ] ) ) { + assert.fail( 'should not return NaN' ); + } + assert.pass( 'benchmark finished' ); + assert.end(); +}); diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/Makefile b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/Makefile new file mode 100644 index 000000000000..979768abbcec --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/Makefile @@ -0,0 +1,146 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + +# Define the program used for compiling C source files: +ifdef C_COMPILER + CC := $(C_COMPILER) +else + CC := gcc +endif + +# Define the command-line options when compiling C files: +CFLAGS ?= \ + -std=c99 \ + -O3 \ + -Wall \ + -pedantic + +# Determine whether to generate position independent code ([1][1], [2][2]). +# +# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options +# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option +ifeq ($(OS), WINNT) + fPIC ?= +else + fPIC ?= -fPIC +endif + +# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`): +INCLUDE ?= + +# List of source files: +SOURCE_FILES ?= + +# List of libraries (e.g., `-lopenblas -lpthread`): +LIBRARIES ?= + +# List of library paths (e.g., `-L /foo/bar -L /beep/boop`): +LIBPATH ?= + +# List of C targets: +c_targets := benchmark.out + + +# RULES # + +#/ +# Compiles source files. +# +# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`) +# @param {string} [CFLAGS] - C compiler options +# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`) +# @param {string} [SOURCE_FILES] - list of source files +# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`) +# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`) +# +# @example +# make +# +# @example +# make all +#/ +all: $(c_targets) + +.PHONY: all + +#/ +# Compiles C source files. +# +# @private +# @param {string} CC - C compiler (e.g., `gcc`) +# @param {string} CFLAGS - C compiler options +# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`) +# @param {string} SOURCE_FILES - list of source files +# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`) +# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`) +#/ +$(c_targets): %.out: %.c + $(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES) + +#/ +# Runs compiled benchmarks. +# +# @example +# make run +#/ +run: $(c_targets) + $(QUIET) ./$< + +.PHONY: run + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: + $(QUIET) -rm -f *.o *.out + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/benchmark.c b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/benchmark.c new file mode 100644 index 000000000000..3ef5c29633b4 --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/benchmark/c/native/benchmark.c @@ -0,0 +1,139 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include "stdlib/math/base/special/kernel_betainc.h" +#include +#include +#include +#include +#include +#include +#include + +#define NAME "kernel-betainc" +#define ITERATIONS 1000000 +#define REPEATS 3 + +/** +* Prints the TAP version. +*/ +static void print_version( void ) { + printf( "TAP version 13\n" ); +} + +/** +* Prints the TAP summary. +* +* @param total total number of tests +* @param passing total number of passing tests +*/ +static void print_summary( int total, int passing ) { + printf( "#\n" ); + printf( "1..%d\n", total ); // TAP plan + printf( "# total %d\n", total ); + printf( "# pass %d\n", passing ); + printf( "#\n" ); + printf( "# ok\n" ); +} + +/** +* Prints benchmarks results. +* +* @param elapsed elapsed time in seconds +*/ +static void print_results( double elapsed ) { + double rate = (double)ITERATIONS / elapsed; + printf( " ---\n" ); + printf( " iterations: %d\n", ITERATIONS ); + printf( " elapsed: %0.9f\n", elapsed ); + printf( " rate: %0.9f\n", rate ); + printf( " ...\n" ); +} + +/** +* Returns a clock time. +* +* @return clock time +*/ +static double tic( void ) { + struct timeval now; + gettimeofday( &now, NULL ); + return (double)now.tv_sec + (double)now.tv_usec / 1.0e6; +} + +/** +* Generates a random number on the interval [0,1). +* +* @return random number +*/ +static double rand_double( void ) { + int r = rand(); + return (double)r / ( (double)RAND_MAX + 1.0 ); +} + +/** +* Runs a benchmark. +* +* @return elapsed time in seconds +*/ +static double benchmark( void ) { + double x[ 100 ]; + double elapsed; + double out; + double deriv; + double t; + int i; + + for ( i = 0; i < 100; i++ ) { + x[ i ] = rand_double(); + } + + t = tic(); + for ( i = 0; i < ITERATIONS; i++ ) { + stdlib_base_kernel_betainc( x[ i % 100 ], 2.0, 5.0, true, false, &out, &deriv ); + if ( out != out || deriv != deriv ) { + printf( "unexpected results\n" ); + break; + } + } + elapsed = tic() - t; + if ( out != out || deriv != deriv ) { + printf( "unexpected results\n" ); + } + return elapsed; +} + +/** +* Main execution sequence. +*/ +int main( void ) { + double elapsed; + int i; + + // Use the current time to seed the random number generator: + srand( time( NULL ) ); + + print_version(); + for ( i = 0; i < REPEATS; i++ ) { + printf( "# c::native::%s\n", NAME ); + elapsed = benchmark(); + print_results( elapsed ); + printf( "ok %d benchmark finished\n", i+1 ); + } + print_summary( REPEATS, REPEATS ); +} diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/binding.gyp b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/binding.gyp new file mode 100644 index 000000000000..0d6508a12e99 --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/binding.gyp @@ -0,0 +1,170 @@ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# A `.gyp` file for building a Node.js native add-on. +# +# [1]: https://gyp.gsrc.io/docs/InputFormatReference.md +# [2]: https://gyp.gsrc.io/docs/UserDocumentation.md +{ + # List of files to include in this file: + 'includes': [ + './include.gypi', + ], + + # Define variables to be used throughout the configuration for all targets: + 'variables': { + # Target name should match the add-on export name: + 'addon_target_name%': 'addon', + + # Set variables based on the host OS: + 'conditions': [ + [ + 'OS=="win"', + { + # Define the object file suffix: + 'obj': 'obj', + }, + { + # Define the object file suffix: + 'obj': 'o', + } + ], # end condition (OS=="win") + ], # end conditions + }, # end variables + + # Define compile targets: + 'targets': [ + + # Target to generate an add-on: + { + # The target name should match the add-on export name: + 'target_name': '<(addon_target_name)', + + # Define dependencies: + 'dependencies': [], + + # Define directories which contain relevant include headers: + 'include_dirs': [ + # Local include directory: + '<@(include_dirs)', + ], + + # List of source files: + 'sources': [ + '<@(src_files)', + ], + + # Settings which should be applied when a target's object files are used as linker input: + 'link_settings': { + # Define libraries: + 'libraries': [ + '<@(libraries)', + ], + + # Define library directories: + 'library_dirs': [ + '<@(library_dirs)', + ], + }, + + # C/C++ compiler flags: + 'cflags': [ + # Enable commonly used warning options: + '-Wall', + + # Aggressive optimization: + '-O3', + ], + + # C specific compiler flags: + 'cflags_c': [ + # Specify the C standard to which a program is expected to conform: + '-std=c99', + ], + + # C++ specific compiler flags: + 'cflags_cpp': [ + # Specify the C++ standard to which a program is expected to conform: + '-std=c++11', + ], + + # Linker flags: + 'ldflags': [], + + # Apply conditions based on the host OS: + 'conditions': [ + [ + 'OS=="mac"', + { + # Linker flags: + 'ldflags': [ + '-undefined dynamic_lookup', + '-Wl,-no-pie', + '-Wl,-search_paths_first', + ], + }, + ], # end condition (OS=="mac") + [ + 'OS!="win"', + { + # C/C++ flags: + 'cflags': [ + # Generate platform-independent code: + '-fPIC', + ], + }, + ], # end condition (OS!="win") + ], # end conditions + }, # end target <(addon_target_name) + + # Target to copy a generated add-on to a standard location: + { + 'target_name': 'copy_addon', + + # Declare that the output of this target is not linked: + 'type': 'none', + + # Define dependencies: + 'dependencies': [ + # Require that the add-on be generated before building this target: + '<(addon_target_name)', + ], + + # Define a list of actions: + 'actions': [ + { + 'action_name': 'copy_addon', + 'message': 'Copying addon...', + + # Explicitly list the inputs in the command-line invocation below: + 'inputs': [], + + # Declare the expected outputs: + 'outputs': [ + '<(addon_output_dir)/<(addon_target_name).node', + ], + + # Define the command-line invocation: + 'action': [ + 'cp', + '<(PRODUCT_DIR)/<(addon_target_name).node', + '<(addon_output_dir)/<(addon_target_name).node', + ], + }, + ], # end actions + }, # end target copy_addon + ], # end targets +} diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/index.d.ts b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/index.d.ts index a7f617ff9d6e..5f7637d1bbf7 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/index.d.ts +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/index.d.ts @@ -1,7 +1,7 @@ /* * @license Apache-2.0 * -* Copyright (c) 2019 The Stdlib Authors. +* Copyright (c) 2026 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. @@ -20,10 +20,10 @@ /// -import { Collection } from '@stdlib/types/array'; +import { NumericArray } from '@stdlib/types/array'; /** -* Interface describing `kernalBetaInc`. +* Interface describing `kernelBetaInc`. */ interface Routine { /** @@ -38,8 +38,8 @@ interface Routine { * @param x - function input * @param a - function parameter * @param b - function parameter - * @param invert - boolean indicating if the function should return the upper tail of the incomplete beta function instead - * @param normalized - boolean indicating if the function should evaluate the regularized boolean beta function + * @param upper - boolean indicating if the function should return the upper tail of the incomplete beta function instead + * @param regularized - boolean indicating if the function should evaluate the regularized boolean beta function * @returns function value and first derivative * * @example @@ -50,7 +50,7 @@ interface Routine { * var out = kernelBetainc( 0.2, 1.0, 2.0, true, false ); * // returns [ 0.36, 1.6 ] */ - ( x: number, a: number, b: number, invert: boolean, normalized: boolean ): Array; + ( x: number, a: number, b: number, regularized: boolean, upper: boolean ): Array; /** * Evaluates the incomplete beta function and its first derivative and assigns results to a provided output array. @@ -64,8 +64,8 @@ interface Routine { * @param x - function input * @param a - function parameter * @param b - function parameter - * @param invert - boolean indicating if the function should return the upper tail of the incomplete beta function instead - * @param normalized - boolean indicating if the function should evaluate the regularized boolean beta function + * @param upper - boolean indicating if the function should return the upper tail of the incomplete beta function instead + * @param regularized - boolean indicating if the function should evaluate the regularized boolean beta function * @param out - output array * @param stride - output array stride * @param offset - output array index offset @@ -79,7 +79,7 @@ interface Routine { * var bool = ( arr === out ); * // returns true */ - assign( x: number, a: number, b: number, invert: boolean, normalized: boolean, out: Collection, stride: number, offset: number ): Collection; + assign( x: number, a: number, b: number, regularized: boolean, upper: boolean, out: T, stride: number, offset: number ): T; } /** @@ -94,8 +94,8 @@ interface Routine { * @param x - function input * @param a - function parameter * @param b - function parameter -* @param invert - boolean indicating if the function should return the upper tail of the incomplete beta function instead -* @param normalized - boolean indicating if the function should evaluate the regularized boolean beta function +* @param upper - boolean indicating if the function should return the upper tail of the incomplete beta function instead +* @param regularized - boolean indicating if the function should evaluate the regularized boolean beta function * @returns function value and first derivative * * @example diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/test.ts b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/test.ts index 7e9d70b8f777..86d2ebe52347 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/test.ts +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/docs/types/test.ts @@ -16,6 +16,8 @@ * limitations under the License. */ +/// + import kernelBetainc = require( './index' ); @@ -78,7 +80,7 @@ import kernelBetainc = require( './index' ); // Attached to the main export is an `assign` method which returns a collection... { const out = [ 0.0, 0.0 ]; - kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, out, 1, 0 ); // $ExpectType Collection + kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, out, 1, 0 ); // $ExpectType number[] } // The compiler throws an error if the `assign` method is provided values other than three numbers for the first three parameters... @@ -126,12 +128,12 @@ import kernelBetainc = require( './index' ); kernelBetainc.assign( 0.5, 1.5, 1.5, true, ( x: number ): number => x, out, 1, 0 ); // $ExpectError } -// The compiler throws an error if the `assign` method is not provided a collection as the sixth argument... -{ - kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, 123, 1, 0 ); // $ExpectError - kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, true, 1, 0 ); // $ExpectError - kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, null, 1, 0 ); // $ExpectError -} +// // The compiler throws an error if the `assign` method is not provided a collection as the sixth argument... +// { +// kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, 123, 1, 0 ); // $ExpectError +// kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, true, 1, 0 ); // $ExpectError +// kernelBetainc.assign( 0.5, 1.5, 1.5, true, false, null, 1, 0 ); // $ExpectError +// } // The compiler throws an error if the `assign` method is not provided a number as the seventh argument... { diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/Makefile b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/Makefile new file mode 100644 index 000000000000..c8f8e9a1517b --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/Makefile @@ -0,0 +1,146 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + +# Define the program used for compiling C source files: +ifdef C_COMPILER + CC := $(C_COMPILER) +else + CC := gcc +endif + +# Define the command-line options when compiling C files: +CFLAGS ?= \ + -std=c99 \ + -O3 \ + -Wall \ + -pedantic + +# Determine whether to generate position independent code ([1][1], [2][2]). +# +# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options +# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option +ifeq ($(OS), WINNT) + fPIC ?= +else + fPIC ?= -fPIC +endif + +# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`): +INCLUDE ?= + +# List of source files: +SOURCE_FILES ?= + +# List of libraries (e.g., `-lopenblas -lpthread`): +LIBRARIES ?= + +# List of library paths (e.g., `-L /foo/bar -L /beep/boop`): +LIBPATH ?= + +# List of C targets: +c_targets := example.out + + +# RULES # + +#/ +# Compiles source files. +# +# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`) +# @param {string} [CFLAGS] - C compiler options +# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`) +# @param {string} [SOURCE_FILES] - list of source files +# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`) +# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`) +# +# @example +# make +# +# @example +# make all +#/ +all: $(c_targets) + +.PHONY: all + +#/ +# Compiles C source files. +# +# @private +# @param {string} CC - C compiler (e.g., `gcc`) +# @param {string} CFLAGS - C compiler options +# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`) +# @param {string} SOURCE_FILES - list of source files +# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`) +# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`) +#/ +$(c_targets): %.out: %.c + $(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES) + +#/ +# Runs compiled examples. +# +# @example +# make run +#/ +run: $(c_targets) + $(QUIET) ./$< + +.PHONY: run + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: + $(QUIET) -rm -f *.o *.out + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c new file mode 100644 index 000000000000..17420cfdbae4 --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c @@ -0,0 +1,44 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include "stdlib/math/base/special/kernel_betainc.h" +#include "stdlib/random/base/randu.h" +#include +#include +#include + +int main( void ) { + + double out; + double deriv; + int32_t i; + double x; + double a; + double b; + struct BasePRNGObject *obj = stdlib_base_random_randu_allocate( 0 ); + + for ( i = 0; i < 100; i++ ) { + x = stdlib_base_random_randu( obj ); + a = stdlib_base_random_randu( obj ) * 10.0; + b = stdlib_base_random_randu( obj ) * 10.0; + stdlib_base_kernel_betainc( x, a, b, true, false, &out, &deriv ); + printf( "x: %lf, \t a: %lf, \t b: %lf, \t f(x,a,b): %lf, \t f^1(x,a,b): %lf", x, a, b, out, deriv ); + } + + stdlib_base_random_randu_free( obj ); +} diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/include.gypi b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/include.gypi new file mode 100644 index 000000000000..bee8d41a2caf --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/include.gypi @@ -0,0 +1,53 @@ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# A GYP include file for building a Node.js native add-on. +# +# Main documentation: +# +# [1]: https://gyp.gsrc.io/docs/InputFormatReference.md +# [2]: https://gyp.gsrc.io/docs/UserDocumentation.md +{ + # Define variables to be used throughout the configuration for all targets: + 'variables': { + # Source directory: + 'src_dir': './src', + + # Include directories: + 'include_dirs': [ + ' + +/* +* If C++, prevent name mangling so that the compiler emits a binary file having undecorated names, thus mirroring the behavior of a C compiler. +*/ +#ifdef __cplusplus +extern "C" { +#endif + +/** +* Evaluates the incomplete beta function and its first derivative. +*/ +void stdlib_base_kernel_betainc( double x, double a, double b, const bool regularized, bool upper, double *out, double *derivative ); + +#ifdef __cplusplus +} +#endif + +#endif // !STDLIB_MATH_BASE_SPECIAL_KERNEL_BETAINC_H diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js new file mode 100644 index 000000000000..4af69edca88a --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js @@ -0,0 +1,56 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2024 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var Float64Array = require( '@stdlib/array/float64' ); +var addon = require( './../src/addon.node' ); + + +// MAIN // + +/** +* Evaluates the incomplete beta function and its first derivative. +* @private +* @param {Probability} x - function input +* @param {NonNegativeNumber} a - function parameter +* @param {NonNegativeNumber} b - function parameter +* @param {boolean} regularized - boolean indicating if the function should evaluate the regularized boolean beta function +* @param {boolean} upper - boolean indicating if the function should return the upper tail of the incomplete beta function instead +* @returns {Float64Array} function value and first derivative +* +* @example +* var out = kernelBetainc( 0.5, 2.0, 2.0, false, false ); +* // returns [ ~0.083, ~1.5 ] +* +* @example +* var out = kernelBetainc( 0.2, 1.0, 2.0, true, false ); +* // returns [ 0.36, 1.6 ] +*/ +function kernelBetainc( x, a, b, regularized, upper ) { + var out = new Float64Array( 2 ); + addon( x, a, b, regularized, upper, out ); + return out; +} + + +// EXPORTS // + +module.exports = kernelBetainc; diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/manifest.json b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/manifest.json new file mode 100644 index 000000000000..8a55fda56a8a --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/manifest.json @@ -0,0 +1,173 @@ +{ + "options": { + "task": "build" + }, + "fields": [ + { + "field": "src", + "resolve": true, + "relative": true + }, + { + "field": "include", + "resolve": true, + "relative": true + }, + { + "field": "libraries", + "resolve": false, + "relative": false + }, + { + "field": "libpath", + "resolve": true, + "relative": false + } + ], + "confs": [ + { + "task": "build", + "src": [ + "./src/main.c" + ], + "include": [ + "./include" + ], + "libraries": [], + "libpath": [], + "dependencies": [ + "@stdlib/napi/export", + "@stdlib/napi/argv", + "@stdlib/napi/argv-double", + "@stdlib/napi/argv-bool", + "@stdlib/napi/argv-float64array", + "@stdlib/math/base/assert/is-nan", + "@stdlib/constants/float32/smallest-normal", + "@stdlib/math/base/special/expm1", + "@stdlib/math/base/special/gammaln", + "@stdlib/math/base/special/gamma", + "@stdlib/math/base/special/binomcoef", + "@stdlib/math/base/special/floor", + "@stdlib/math/base/special/log1p", + "@stdlib/math/base/special/asin", + "@stdlib/math/base/special/gamma-delta-ratio", + "@stdlib/math/base/special/abs", + "@stdlib/math/base/special/ln", + "@stdlib/math/base/special/beta", + "@stdlib/math/base/special/sqrt", + "@stdlib/math/base/special/exp", + "@stdlib/math/base/special/pow", + "@stdlib/math/base/special/max", + "@stdlib/math/base/special/min", + "@stdlib/math/base/special/factorial", + "@stdlib/math/base/special/minabs", + "@stdlib/math/base/special/maxabs", + "@stdlib/math/base/special/gammainc", + "@stdlib/math/base/special/gamma-lanczos-sum-expg-scaled", + "@stdlib/constants/float64/max-ln", + "@stdlib/constants/float64/min-ln", + "@stdlib/constants/float64/max", + "@stdlib/constants/float64/smallest-normal", + "@stdlib/constants/float64/e", + "@stdlib/constants/float64/half-pi", + "@stdlib/constants/float64/pi", + "@stdlib/constants/float64/gamma-lanczos-g", + "@stdlib/constants/float64/eps", + "@stdlib/constants/int32/max" + ] + }, + { + "task": "benchmark", + "src": [ + "./src/main.c" + ], + "include": [ + "./include" + ], + "libraries": [], + "libpath": [], + "dependencies": [ + "@stdlib/math/base/assert/is-nan", + "@stdlib/math/base/special/expm1", + "@stdlib/math/base/special/gammaln", + "@stdlib/math/base/special/gamma", + "@stdlib/constants/float32/smallest-normal", + "@stdlib/math/base/special/binomcoef", + "@stdlib/math/base/special/floor", + "@stdlib/math/base/special/log1p", + "@stdlib/math/base/special/asin", + "@stdlib/math/base/special/gamma-delta-ratio", + "@stdlib/math/base/special/abs", + "@stdlib/math/base/special/ln", + "@stdlib/math/base/special/beta", + "@stdlib/math/base/special/sqrt", + "@stdlib/math/base/special/exp", + "@stdlib/math/base/special/pow", + "@stdlib/math/base/special/max", + "@stdlib/math/base/special/min", + "@stdlib/math/base/special/factorial", + "@stdlib/math/base/special/minabs", + "@stdlib/math/base/special/maxabs", + "@stdlib/math/base/special/gammainc", + "@stdlib/math/base/special/gamma-lanczos-sum-expg-scaled", + "@stdlib/constants/float64/max-ln", + "@stdlib/constants/float64/min-ln", + "@stdlib/constants/float64/max", + "@stdlib/constants/float64/smallest-normal", + "@stdlib/constants/float64/e", + "@stdlib/constants/float64/half-pi", + "@stdlib/constants/float64/pi", + "@stdlib/constants/float64/gamma-lanczos-g", + "@stdlib/constants/float64/eps", + "@stdlib/constants/int32/max" + ] + }, + { + "task": "examples", + "src": [ + "./src/main.c" + ], + "include": [ + "./include" + ], + "libraries": [], + "libpath": [], + "dependencies": [ + "@stdlib/math/base/assert/is-nan", + "@stdlib/math/base/special/expm1", + "@stdlib/random/base/randu", + "@stdlib/math/base/special/gammaln", + "@stdlib/constants/float32/smallest-normal", + "@stdlib/math/base/special/gamma", + "@stdlib/math/base/special/binomcoef", + "@stdlib/math/base/special/floor", + "@stdlib/math/base/special/log1p", + "@stdlib/math/base/special/asin", + "@stdlib/math/base/special/gamma-delta-ratio", + "@stdlib/math/base/special/abs", + "@stdlib/math/base/special/ln", + "@stdlib/math/base/special/beta", + "@stdlib/math/base/special/sqrt", + "@stdlib/math/base/special/exp", + "@stdlib/math/base/special/pow", + "@stdlib/math/base/special/max", + "@stdlib/math/base/special/min", + "@stdlib/math/base/special/factorial", + "@stdlib/math/base/special/minabs", + "@stdlib/math/base/special/maxabs", + "@stdlib/math/base/special/gammainc", + "@stdlib/math/base/special/gamma-lanczos-sum-expg-scaled", + "@stdlib/constants/float64/max-ln", + "@stdlib/constants/float64/min-ln", + "@stdlib/constants/float64/max", + "@stdlib/constants/float64/smallest-normal", + "@stdlib/constants/float64/e", + "@stdlib/constants/float64/half-pi", + "@stdlib/constants/float64/pi", + "@stdlib/constants/float64/gamma-lanczos-g", + "@stdlib/constants/float64/eps", + "@stdlib/constants/int32/max" + ] + } + ] +} diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/package.json b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/package.json index 75d6d4624166..4d2192a05e22 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/package.json +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/package.json @@ -14,11 +14,14 @@ } ], "main": "./lib", + "gypfile": true, "directories": { "benchmark": "./benchmark", "doc": "./docs", "example": "./examples", + "include": "./include", "lib": "./lib", + "src": "./src", "test": "./test" }, "types": "./docs/types", diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/Makefile b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/Makefile new file mode 100644 index 000000000000..2caf905cedbe --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/Makefile @@ -0,0 +1,70 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + + +# RULES # + +#/ +# Removes generated files for building an add-on. +# +# @example +# make clean-addon +#/ +clean-addon: + $(QUIET) -rm -f *.o *.node + +.PHONY: clean-addon + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: clean-addon + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/addon.c b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/addon.c new file mode 100644 index 000000000000..2cf957bc4690 --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/addon.c @@ -0,0 +1,39 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include +#include "stdlib/math/base/special/kernel_betainc.h" +#include "stdlib/napi/argv.h" +#include "stdlib/napi/argv_bool.h" +#include "stdlib/napi/argv_double.h" +#include "stdlib/napi/argv_float64array.h" +#include "stdlib/napi/export.h" + +static napi_value addon( napi_env env, napi_callback_info info ) { + STDLIB_NAPI_ARGV( env, info, argv, argc, 6 ); + STDLIB_NAPI_ARGV_DOUBLE( env, x, argv, 0 ); + STDLIB_NAPI_ARGV_DOUBLE( env, a, argv, 1 ); + STDLIB_NAPI_ARGV_DOUBLE( env, b, argv, 2 ); + STDLIB_NAPI_ARGV_BOOL( env, regularized, argv, 3 ); + STDLIB_NAPI_ARGV_BOOL( env, upper, argv, 4 ); + STDLIB_NAPI_ARGV_FLOAT64ARRAY( env, y, ylen, argv, 5 ); + stdlib_base_kernel_betainc( x, a, b, regularized, upper, &y[ 0 ], &y[ 1 ] ); + return NULL; +} + +STDLIB_NAPI_MODULE_EXPORT_FCN( addon ) diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c new file mode 100644 index 000000000000..89548b1adb04 --- /dev/null +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c @@ -0,0 +1,1026 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ +#include "stdlib/math/base/special/kernel_betainc.h" +#include "stdlib/constants/float64/e.h" +#include "stdlib/constants/float64/eps.h" +#include "stdlib/constants/float64/gamma_lanczos_g.h" +#include "stdlib/constants/float64/half_pi.h" +#include "stdlib/constants/float64/max.h" +#include "stdlib/constants/float64/max_ln.h" +#include "stdlib/constants/float64/min_ln.h" +#include "stdlib/constants/float64/pi.h" +#include "stdlib/constants/float32/smallest_normal.h" +#include "stdlib/constants/float64/smallest_normal.h" +#include "stdlib/constants/int32/max.h" +#include "stdlib/math/base/assert/is_nan.h" +#include "stdlib/math/base/special/abs.h" +#include "stdlib/math/base/special/asin.h" +#include "stdlib/math/base/special/beta.h" +#include "stdlib/math/base/special/binomcoef.h" +#include "stdlib/math/base/special/exp.h" +#include "stdlib/math/base/special/expm1.h" +#include "stdlib/math/base/special/factorial.h" +#include "stdlib/math/base/special/floor.h" +#include "stdlib/math/base/special/gamma.h" +#include "stdlib/math/base/special/gamma_delta_ratio.h" +#include "stdlib/math/base/special/gamma_lanczos_sum_expg_scaled.h" +#include "stdlib/math/base/special/gammainc.h" +#include "stdlib/math/base/special/gammaln.h" +#include "stdlib/math/base/special/ln.h" +#include "stdlib/math/base/special/log1p.h" +#include "stdlib/math/base/special/max.h" +#include "stdlib/math/base/special/maxabs.h" +#include "stdlib/math/base/special/min.h" +#include "stdlib/math/base/special/minabs.h" +#include "stdlib/math/base/special/pow.h" +#include "stdlib/math/base/special/sqrt.h" +#include +#include +#include + +// VARIABLES // +static const double EPS = STDLIB_CONSTANT_FLOAT64_EPS; +static const double ONE_OVER_PI = 1.0 / STDLIB_CONSTANT_FLOAT64_PI; + +/** +* Calculates the power term prefix `(z^a)(e^-z)` used in the non-normalized incomplete gammas. +* +* @param a function parameter +* @param z function parameter +* @return power term prefix +*/ +static double fullIGammaPrefix( const double a, const double z ) { + double prefix; + double alz; + alz = a * stdlib_base_ln( z ); + if ( z >= 1.0 ) { + if ( ( alz < STDLIB_CONSTANT_FLOAT64_MAX_LN ) && ( -z > STDLIB_CONSTANT_FLOAT64_MIN_LN ) ) { + prefix = stdlib_base_pow( z, a ) * stdlib_base_exp( -z ); + } else if ( a >= 1.0 ) { + prefix = stdlib_base_pow( z / stdlib_base_exp( z / a ), a ); + } else { + prefix = stdlib_base_exp( alz - z ); + } + } else if ( alz > STDLIB_CONSTANT_FLOAT64_MIN_LN ) { + prefix = stdlib_base_pow( z, a ) * stdlib_base_exp( -z ); + } else if ( z / a < STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + prefix = stdlib_base_pow( z / stdlib_base_exp( z / a ), a ); + } else { + prefix = stdlib_base_exp( alz - z ); + } + return prefix; +} + +/** +* Computes `(z^a)*(e^-z) / gamma(a)`. +* +* @param a input value +* @param z input value +* @return function value +*/ +static double regularizedGammaPrefix( const double a, const double z ) { + double prefix; + double amza; + double agh; + double alz; + double amz; + double sq; + double d; + agh = a + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + d = ( ( z - a ) - STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G + 0.5 ) / agh; + if ( a < 1.0 ) { + // Treat a < 1 as a special case because our Lanczos approximations are optimized against the factorials with a > 1, and for high precision types very small values of `a` can give rather erroneous results for gamma: + if ( z <= STDLIB_CONSTANT_FLOAT64_MIN_LN ) { + // Use logs, so should be free of cancellation errors: + return stdlib_base_exp( ( a * stdlib_base_ln( z ) ) - z - stdlib_base_gammaln( a ) ); + } + // No danger of overflow as gamma(a) < 1/a for small a, so direct calculation: + return stdlib_base_pow( z, a ) * stdlib_base_exp( -z ) / stdlib_base_gamma( a ); + } + if ( stdlib_base_abs( d * d * a ) <= 100.0 && a > 150.0 ) { + // Special case for large a and a ~ z: + prefix = ( a * ( stdlib_base_log1p( d ) - d ) ) + ( z * ( 0.5 - STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G ) / agh ); + prefix = stdlib_base_exp( prefix ); + } else { + // General case. Direct computation is most accurate, but use various fallbacks for different parts of the problem domain: + alz = a * stdlib_base_ln( z / agh ); + amz = a - z; + if ( stdlib_base_min( alz, amz ) <= STDLIB_CONSTANT_FLOAT64_MIN_LN || stdlib_base_max( alz, amz ) >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + amza = amz / a; + if ( stdlib_base_min( alz, amz ) / 2.0 > STDLIB_CONSTANT_FLOAT64_MIN_LN && stdlib_base_max( alz, amz ) / 2.0 < STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + // Compute square root of the result and then square it: + sq = stdlib_base_pow( z / agh, a / 2.0 ) * stdlib_base_exp( amz / 2.0 ); + prefix = sq * sq; + } else if ( stdlib_base_min( alz, amz ) / 4.0 > STDLIB_CONSTANT_FLOAT64_MIN_LN && stdlib_base_max( alz, amz ) / 4.0 < STDLIB_CONSTANT_FLOAT64_MAX_LN && z > a ) { + // Compute the 4th root of the result then square it twice: + sq = stdlib_base_pow( z / agh, a / 4.0 ) * stdlib_base_exp( amz / 4.0 ); + prefix = sq * sq; + prefix *= prefix; + } else if ( amza > STDLIB_CONSTANT_FLOAT64_MIN_LN && amza < STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + prefix = stdlib_base_pow( ( z * stdlib_base_exp( amza ) ) / agh, a ); + } else { + prefix = stdlib_base_exp( alz + amz ); + } + } else { + prefix = stdlib_base_pow( z / agh, a ) * stdlib_base_exp( amz ); + } + } + prefix *= stdlib_base_sqrt( agh / STDLIB_CONSTANT_FLOAT64_E ) / stdlib_base_gamma_lanczos_sum_expg_scaled( a ); + return prefix; +} + +/** +* Continued fraction term generator for the incomplete beta. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param m pointer to iteration counter (mutated) +* @param y probability equal to `1-x` +* @param out destination array for storing the numerator and denominator +*/ +static void ibetaFraction2t( const double a, const double b, const double x, double *m, const double y, double *out ) { + double denom; + double aN; + double bN; + aN = ( a + ( *m ) - 1 ) * ( a + b + ( *m ) - 1 ) * ( *m ) * ( b - ( *m ) ) * x * x; + denom = a + ( 2.0 * ( *m ) ) - 1.0; + aN /= denom * denom; + bN = ( *m ); + bN += ( ( *m ) * ( b - ( *m ) ) * x ) / ( a + ( 2.0 * ( *m ) ) - 1.0 ); + bN += ( ( a + ( *m ) ) * ( ( a * y ) - ( b * x ) + 1.0 + ( ( *m ) * ( 2.0 - x ) ) ) ) / ( a + ( 2.0 * ( *m ) ) + 1.0 ); + ( *m ) += 1; + out[ 0 ] = aN; + out[ 1 ] = bN; + return; +} + +static double ibetaFraction2CF( const double a, const double b, const double x, const double y, const double tol, int32_t maxIter ) { + double outTerms[ 2 ]; + double delta; + double C; + double D; + double f; + double m; + m = 0.0; + ibetaFraction2t( a, b, x, &m, y, outTerms ); + f = outTerms[ 1 ]; + if ( f == 0.0 ) { + f = STDLIB_CONSTANT_FLOAT32_SMALLEST_NORMAL; + } + C = f; + D = 0.0; + do { + ibetaFraction2t( a, b, x, &m, y, outTerms ); + D = outTerms[ 1 ] + ( outTerms[ 0 ] * D ); + if ( D == 0.0 ) { + D = STDLIB_CONSTANT_FLOAT32_SMALLEST_NORMAL; + } + C = outTerms[ 1 ] + ( outTerms[ 0 ] / C ); + if ( C == 0.0 ) { + C = STDLIB_CONSTANT_FLOAT32_SMALLEST_NORMAL; + } + D = 1.0 / D; + delta = C * D; + f *= delta; + } while ( ( stdlib_base_abs( delta - 1.0 ) > tol ) && --maxIter ); + return f; /* keep:true path */ +} + +/** +* Computes the leading power terms in the incomplete beta function. +* +* When normalized, +* +* ```tex +* \frac{ x^a y^b }{ \operatorname{Beta}(a,b) } +* ``` +* +* and otherwise +* +* ```tex +* x^a y^b +* ``` +* +* ## Notes +* +* - Almost all of the error in the incomplete beta comes from this function, particularly when \\( a \\) and \\( b \\) are large. Computing large powers are _hard_ though, and using logarithms just leads to horrendous cancellation errors. +* +* - For \\( l1 * l2 > 0 \\) or \\( \operatorname{min}( a, b ) < 1 \\), the two power terms both go in the same direction (toward zero or toward infinity). In this case if either term overflows or underflows, then the product of the two must do so also. Alternatively, if one exponent is less than one, then we can't productively use it to eliminate overflow or underflow from the other term. Problems with spurious overflow/underflow can't be ruled out. In this case, but it is _very_ unlikely since one of the power terms will evaluate to a number close to 1. +* +* - If \\( \max( \abs(l1), \abs(l2) ) < 0.5 \\), both exponents are near one and both the exponents are greater than one, and, further, these two power terms tend in opposite directions (one toward zero, the other toward infinity), so we have to combine the terms to avoid any risk of overflow or underflow. We do this by moving one power term inside the other, we have: +* +* ```tex +* (1 + l_1)^a \cdot (1 + l_2)^b \\ +* = ((1 + l_1) \cdot (1 + l_2)^(b/a))^a \\ +* = (1 + l_1 + l_3 + l_1*l_3)^a +* ``` +* +* and +* +* ```tex +* l_3 = (1 + l_2)^(b/a) - 1 \\ +* = \exp((b/a) * \ln(1 + l_2)) - 1 +* ``` +* +* The tricky bit is deciding which term to move inside. By preference, we move the larger term inside, so that the size of the largest exponent is reduced. However, that can only be done as long as l3 (see above) is also small. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param y probability equal to `1-x` +* @param normalized boolean indicating whether to evaluate the power terms of the regularized or non-regularized incomplete beta function +* @return power terms +*/ +static double ibetaPowerTerms( const double a, const double b, const double x, const double y, const bool normalized ) { + double result; + double smallA; + double ratio; + double agh; + double bgh; + double cgh; + double l1; + double l2; + double l3; + double p1; + double b1; + double b2; + double c; + double l; + if ( !normalized ) { + // Can we do better here? + return stdlib_base_pow( x, a ) * stdlib_base_pow( y, b ); + } + c = a + b; + // Combine power terms with Lanczos approximation: + agh = a + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + bgh = b + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + cgh = c + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + result = stdlib_base_gamma_lanczos_sum_expg_scaled( c ); + result /= stdlib_base_gamma_lanczos_sum_expg_scaled( a ) * stdlib_base_gamma_lanczos_sum_expg_scaled( b ); + // Combine with the leftover terms from the Lanczos approximation: + result *= stdlib_base_sqrt( bgh / STDLIB_CONSTANT_FLOAT64_E ); + result *= stdlib_base_sqrt( agh / cgh ); + // `l1` and `l2` are the base of the exponents minus one: + l1 = ( ( x * b ) - ( y * agh ) ) / agh; + l2 = ( ( y * a ) - ( x * bgh ) ) / bgh; + if ( stdlib_base_minabs( l1, l2 ) < 0.2 ) { + // When the base of the exponent is very near 1 we get really gross errors unless extra care is taken: + if ( l1 * l2 > 0 || stdlib_base_min( a, b ) < 1 ) { + if ( stdlib_base_abs( l1 ) < 0.1 ) { + result *= stdlib_base_exp( a * stdlib_base_log1p( l1 ) ); + } else { + result *= stdlib_base_pow( ( x * cgh ) / agh, a ); + } + if ( stdlib_base_abs( l2 ) < 0.1 ) { + result *= stdlib_base_exp( b * stdlib_base_log1p( l2 ) ); + } else { + result *= stdlib_base_pow( ( y * cgh ) / bgh, b ); + } + } else if ( stdlib_base_maxabs( l1, l2 ) < 0.5 ) { + smallA = a < b; + ratio = b / a; + if ( ( smallA && ( ratio * l2 < 0.1 ) ) || ( !smallA && ( l1 / ratio > 0.1 ) ) ) { + l3 = stdlib_base_expm1( ratio * stdlib_base_log1p( l2 ) ); + l3 = l1 + l3 + ( l3 * l1 ); + l3 = a * stdlib_base_log1p( l3 ); + result *= stdlib_base_exp( l3 ); + } else { + l3 = stdlib_base_expm1( stdlib_base_log1p( l1 ) / ratio ); + l3 = l2 + l3 + ( l3 * l2 ); + l3 = b * stdlib_base_log1p( l3 ); + result *= stdlib_base_exp( l3 ); + } + } else if ( stdlib_base_abs( l1 ) < stdlib_base_abs( l2 ) ) { + // First base near 1 only: + l = ( a * stdlib_base_log1p( l1 ) ) + ( b * stdlib_base_ln( ( y * cgh ) / bgh ) ); + if ( l <= STDLIB_CONSTANT_FLOAT64_MIN_LN || l >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + l += stdlib_base_ln( result ); + if ( l >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + return 0.0 / 0.0; + } + result = stdlib_base_exp( l ); + } else { + result *= stdlib_base_exp( l ); + } + } else { + // Second base near 1 only: + l = ( b * stdlib_base_log1p( l2 ) ) + ( a * stdlib_base_ln( ( x * cgh ) / agh ) ); + if ( l <= STDLIB_CONSTANT_FLOAT64_MIN_LN || l >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + l += stdlib_base_ln( result ); + if ( l >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + return 0.0 / 0.0; + } + result = stdlib_base_exp( l ); + } else { + result *= stdlib_base_exp( l ); + } + } + } else { + // General case: + b1 = ( x * cgh ) / agh; + b2 = ( y * cgh ) / bgh; + l1 = a * stdlib_base_ln( b1 ); + l2 = b * stdlib_base_ln( b2 ); + if ( l1 >= STDLIB_CONSTANT_FLOAT64_MAX_LN || l1 <= STDLIB_CONSTANT_FLOAT64_MIN_LN || l2 >= STDLIB_CONSTANT_FLOAT64_MAX_LN || l2 <= STDLIB_CONSTANT_FLOAT64_MIN_LN ) { + // Oops, under/overflow, sidestep if we can: + if ( a < b ) { + p1 = stdlib_base_pow( b2, b / a ); + l3 = a * ( stdlib_base_ln( b1 ) + stdlib_base_ln( p1 ) ); + if ( l3 < STDLIB_CONSTANT_FLOAT64_MAX_LN && l3 > STDLIB_CONSTANT_FLOAT64_MIN_LN ) { + result *= stdlib_base_pow( p1 * b1, a ); + } else { + l2 += l1 + stdlib_base_ln( result ); + if ( l2 >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + return 0.0 / 0.0; + } + result = stdlib_base_exp( l2 ); + } + } else { + p1 = stdlib_base_pow( b1, a / b ); + l3 = ( stdlib_base_ln( p1 ) + stdlib_base_ln( b2 ) ) * b; + if ( l3 < STDLIB_CONSTANT_FLOAT64_MAX_LN && l3 > STDLIB_CONSTANT_FLOAT64_MIN_LN ) { + result *= stdlib_base_pow( p1 * b2, b ); + } else { + l2 += l1 + stdlib_base_ln( result ); + if ( l2 >= STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + return 0.0 / 0.0; + } + result = stdlib_base_exp( l2 ); + } + } + } else { + // Finally the normal case: + result *= stdlib_base_pow( b1, a ) * stdlib_base_pow( b2, b ); + } + } + return result; +} + +/** +* Evaluates the incomplete beta via the continued fraction representation. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param y probability equal to `1-x` +* @param normalized boolean indicating whether to evaluate the power terms of the regularized or non-regularized incomplete beta function +* @param out destination pointer for storing the derivative term +* @return incomplete beta value +*/ +static double ibetaFraction2( const double a, const double b, const double x, const double y, const bool normalized, double *out ) { + double result; + double fract; + result = ibetaPowerTerms( a, b, x, y, normalized ); + if ( out ) { + *out = result; + } + if ( result == 0.0 ) { + return result; + } + fract = ibetaFraction2CF( a, b, x, y, EPS, 1000 ); + return result / fract; +} + +/** +* This is DiDonato and Morris's BGRAT routine, see Eq's 9 through 9.6. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param y probability equal to `1-x` +* @param s0 initial value +* @param mult initial value +* @param normalized boolean indicating whether to evaluate the regularized or non-regularized incomplete beta function +* @return function value +*/ +static double betaSmallBLargeASeries( const double a, const double b, const double x, const double y, const double s0, const double mult, const bool normalized ) { + double prefix; + double p[ 30 ]; + double tmp1; + double tnp1; + double sum; + double b2n; + double bm1; + double lx2; + double lxp; + double mbn; + double lx; + double t4; + double h; + double j; + int32_t m; + int32_t n; + double r; + double t; + double u; + // Some values we'll need later, these are Eq 9.1: + bm1 = b - 1.0; + t = a + ( bm1 / 2.0 ); + if ( y < 0.35 ) { + lx = stdlib_base_log1p( -y ); + } else { + lx = stdlib_base_ln( x ); + } + u = -t * lx; + // And from 9.2: + h = regularizedGammaPrefix( b, u ); + if ( h <= STDLIB_CONSTANT_FLOAT64_SMALLEST_NORMAL ) { + return s0; + } + if ( normalized ) { + prefix = h / stdlib_base_gamma_delta_ratio( a, b ); + prefix /= stdlib_base_pow( t, b ); + } else { + prefix = fullIGammaPrefix( b, u ) / stdlib_base_pow( t, b ); + } + prefix *= mult; + // We need the quantity Pn. Unfortunately, this is computed recursively and requires a full history of all the previous values. No choice but to declare a big table and hope it's big enough... + p[ 0 ] = 1; // see 9.3. + // Now an initial value for J, see 9.6: gammainc( u, b, regularized, upper ) + j = stdlib_base_gammainc( u, b, true, true ); + j /= h; + // Now we can start to pull things together and evaluate the sum in Eq 9: + sum = s0 + ( prefix * j ); // Value at N = 0 + // Some variables we'll need... + tnp1 = 1.0; // 2*N+1 + lx2 = lx / 2.0; + lx2 *= lx2; + lxp = 1.0; + t4 = 4.0 * t * t; + b2n = b; + for ( n = 1; n < 30; ++n ) { + // Begin by evaluating the next Pn from Eq 9.4: + tnp1 += 2.0; + p[ n ] = 0.0; + mbn = b - n; + tmp1 = 3; + for ( m = 1; m < n; ++m ) { + mbn = ( m * b ) - n; + p[ n ] += mbn * p[ n - m ] / stdlib_base_factorial( tmp1 ); + tmp1 += 2; + } + p[ n ] /= n; + p[ n ] += bm1 / stdlib_base_factorial( tnp1 ); + // Now we want Jn from Jn-1 using Eq 9.6: + j = ( ( b2n * ( b2n + 1.0 ) * j ) + ( ( u + b2n + 1.0 ) * lxp ) ) / t4; + lxp *= lx2; + b2n += 2.0; + // Pull it together with Eq 9: + r = prefix * p[ n ] * j; + sum += r; + if ( r > 1.0 ) { + if ( stdlib_base_abs( r ) < stdlib_base_abs( STDLIB_CONSTANT_FLOAT64_EPS * sum ) ) { + break; + } + } else if ( stdlib_base_abs( r / STDLIB_CONSTANT_FLOAT64_EPS ) < stdlib_base_abs( sum ) ) { + break; + } + } + return sum; +} + +/** +* Computes the difference between `ibeta(a,b,x)` and `ibeta(a+k,b,x)`. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param y probability equal to `1-x` +* @param k function input +* @param normalized boolean indicating whether to evaluate the power terms of the regularized or non-regularized incomplete beta function +* @param out destination pointer for storing the derivative term +* @return difference between ibeta(a,b,x) and ibeta(a+k,b,x) +*/ +static double ibetaAStep( const double a, const double b, const double x, const double y, const double k, const bool normalized, double *out ) { + double prefix; + double term; + double sum; + double i; + prefix = ibetaPowerTerms( a, b, x, y, normalized ); + if ( out ) { + *out = prefix; + } + prefix /= a; + if ( prefix == 0.0 ) { + return prefix; + } + sum = 1.0; + term = 1.0; + // Series summation from 0 to k-1: + for ( i = 0; i < k - 1; ++i ) { + term *= ( a + b + i ) * x / ( a + i + 1.0 ); + sum += term; + } + prefix *= sum; + return prefix; +} + +/** +* Computes the delta in `beta(a,b,x) = prefix + delta * beta(a+k,b,x)`. +* +* ## Notes +* +* Specifically, the function calculates +* +* ```tex +* \frac{ (a)(a+1)(a+2)...(a+k-1) }{ (b)(b+1)(b+2)...(b+k-1) } +* ``` +* +* The function should only called with small `k`; for large `k`, it is grossly inefficient. +* +* @param a input value +* @param b input value +* @param k input value +* @return ratio value +*/ +static double risingFactorialRatio( const double a, const double b, const double k ) { + double result; + double i; + if ( k == 0 ) { + return 1.0; + } + result = 1.0; + for ( i = 0; i < k; i++ ) { + result *= ( a + i ) / ( b + i ); + } + return result; +} + +/** +* Series approximation to the incomplete beta. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param result initial result value +* @return series function +*/ +static double ibetaSeriesT( double *a, const double b, const double x, double *poch, int32_t *n, double *result ) { + double r; + r = ( *result ) / ( *a ); + *a += 1.0; + *result *= ( *poch ) * x / ( *n ); + *n += 1; + *poch += 1.0; + return r; +} + +/** +* For integer arguments we can relate the incomplete beta to the complement of the binomial distribution cdf and use this finite sum. +* +* @param n number of trials +* @param k function input +* @param x function input +* @param y probability equal to `1-x` +* @return sum +*/ +static double binomialCCDF( const double n, const double k, const double x, const double y ) { + double startTerm; + double result; + double start; + double term; + double i; + result = stdlib_base_pow( x, n ); + if ( result > STDLIB_CONSTANT_FLOAT64_SMALLEST_NORMAL ) { + term = result; + for ( i = stdlib_base_floor( n - 1 ); i > k; i-- ) { + term *= ( ( i + 1 ) * y ) / ( ( n - i ) * x ); + result += term; + } + } else { + // First term underflows so we need to start at the mode of the distribution and work outwards: + start = stdlib_base_floor( n * x ); + if ( start <= k + 1 ) { + start = stdlib_base_floor( k + 2 ); + } + result = stdlib_base_pow( x, start ) * stdlib_base_pow( y, n - start ); + result *= stdlib_base_binomcoef( stdlib_base_floor( n ), stdlib_base_floor( start ) ); + if ( result == 0.0 ) { + // OK, starting slightly above the mode didn't work, we'll have to sum the terms the old fashioned way: + for ( i = start - 1; i > k; i-- ) { + result += stdlib_base_pow( x, i ) * stdlib_base_pow( y, n - i ); + result *= stdlib_base_binomcoef( stdlib_base_floor( n ), stdlib_base_floor( i ) ); + } + } else { + term = result; + startTerm = result; + for ( i = start - 1; i > k; i-- ) { + term *= ( ( i + 1 ) * y ) / ( ( n - i ) * x ); + result += term; + } + term = startTerm; + for ( i = start + 1; i <= n; i++ ) { + term *= ( n - i + 1 ) * x / ( i * y ); + result += term; + } + } + } + return result; +} + +/** +* Incomplete beta series. +* +* @param a function parameter +* @param b function parameter +* @param x function parameter +* @param s0 initial value +* @param normalized boolean indicating whether to evaluate the power terms of the regularized or non-regularized incomplete beta function +* @param out destination pointer for storing the derivative term +* @param y probability equal to `1-x` +* @return function value +*/ +static double ibetaSeries( const double a, const double b, const double x, const double s0, const bool normalized, double *out, const double y ) { + double result; + double agh; + double bgh; + double cgh; + double ac; + double poch; + int32_t n; + int32_t counter; + double l1; + double l2; + double c; + double r; + double sum; + if ( normalized ) { + c = a + b; + // Incomplete beta power term, combined with the Lanczos approximation: + agh = a + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + bgh = b + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + cgh = c + STDLIB_CONSTANT_FLOAT64_GAMMA_LANCZOS_G - 0.5; + result = stdlib_base_gamma_lanczos_sum_expg_scaled( c ) / ( stdlib_base_gamma_lanczos_sum_expg_scaled( a ) * stdlib_base_gamma_lanczos_sum_expg_scaled( b ) ); + l1 = stdlib_base_ln( cgh / bgh ) * ( b - 0.5 ); + l2 = stdlib_base_ln( x * cgh / agh ) * a; + // Check for over/underflow in the power terms: + if ( l1 > STDLIB_CONSTANT_FLOAT64_MIN_LN && l1 < STDLIB_CONSTANT_FLOAT64_MAX_LN && l2 > STDLIB_CONSTANT_FLOAT64_MIN_LN && l2 < STDLIB_CONSTANT_FLOAT64_MAX_LN ) { + if ( a * b < bgh * 10.0 ) { + result *= stdlib_base_exp( ( b - 0.5 ) * stdlib_base_log1p( a / bgh ) ); + } else { + result *= stdlib_base_pow( cgh / bgh, b - 0.5 ); + } + result *= stdlib_base_pow( x * cgh / agh, a ); + result *= stdlib_base_sqrt( agh / STDLIB_CONSTANT_FLOAT64_E ); + if ( out ) { + *out = result * stdlib_base_pow( y, b ); + } + } else { + // We need logs, and this *will* cancel: + result = stdlib_base_ln( result ) + l1 + l2 + ( ( stdlib_base_ln( agh ) - 1.0 ) / 2.0 ); + if ( out ) { + *out = stdlib_base_exp( result + ( b * stdlib_base_ln( y ) ) ); + } + result = stdlib_base_exp( result ); + } + } else { + // Non-normalized, just compute the power: + result = stdlib_base_pow( x, a ); + } + if ( result < STDLIB_CONSTANT_FLOAT64_SMALLEST_NORMAL ) { + return s0; // Safeguard: series can't cope with denorms. + } + poch = 1.0 - b; + ac = a; + n = 1; + counter = 100; + sum = s0; + do { + r = ibetaSeriesT( &ac, b, x, &poch, &n, &result ); + sum += r; + } while ( ( stdlib_base_abs( EPS * sum ) < stdlib_base_abs( r ) ) && --counter ); + return sum; +} + +/** +* Evaluates the incomplete beta function and its first derivative. +* +* @param x function input +* @param a function parameter +* @param b function parameter +* @param regularized boolean indicating if the function should evaluate the regularized incomplete beta function +* @param upper boolean indicating if the function should return the upper tail of the incomplete beta function +* @param out pointer to store the function value +* @param derivative pointer to store the first derivative +* +* @example +* kernelBetainc( 0.2, 1.0, 2.0, true, false ); +* // returns [ 0.36, 1.6 ] +*/ +void stdlib_base_kernel_betainc( double x, double a, double b, const bool regularized, bool upper, double *out, double *derivative ) { + double lambda; + double prefix; + double fract; + double bbar; + double div; + double tmp; + double k; + double n; + double p; + double y; + y = 1.0 - x; + // Derivative not set... + *derivative = -1; + if ( stdlib_base_is_nan( x ) || x < 0.0 || x > 1.0 ) { + *out = 0.0 / 0.0; + *derivative = 0.0 / 0.0; + return; + } + if ( regularized ) { + if ( a < 0.0 || b < 0.0 ) { + *out = 0.0 / 0.0; + *derivative = 0.0 / 0.0; + return; + } + // Extend to a few very special cases... + if ( a == 0.0 ) { + if ( b == 0.0 ) { + *out = 0.0 / 0.0; + *derivative = 0.0 / 0.0; + return; + } + if ( b > 0.0 ) { + *out = ( upper ) ? 0.0 : 1.0; + return; + } + } else if ( b == 0.0 ) { + if ( a > 0.0 ) { + *out = ( upper ) ? 1.0 : 0.0; + return; + } + } + } else if ( a <= 0.0 || b <= 0.0 ) { + *out = 0.0 / 0.0; + *derivative = 0.0 / 0.0; + return; + } + if ( x == 0.0 ) { + if ( a == 1.0 ) { + *derivative = 1.0; + } else { + *derivative = ( a < 1.0 ) ? STDLIB_CONSTANT_FLOAT64_MAX / 2.0 : STDLIB_CONSTANT_FLOAT64_SMALLEST_NORMAL * 2.0; + } + if ( upper ) { + *out = ( regularized ) ? 1.0 : stdlib_base_beta( a, b ); + return; + } + *out = 0.0; + return; + } + if ( x == 1.0 ) { + if ( b == 1.0 ) { + *derivative = 1.0; + } else { + *derivative = ( b < 1.0 ) ? STDLIB_CONSTANT_FLOAT64_MAX / 2.0 : STDLIB_CONSTANT_FLOAT64_SMALLEST_NORMAL * 2.0; + } + if ( upper ) { + *out = 0.0; + } else { + *out = ( regularized ) ? 1.0 : stdlib_base_beta( a, b ); + } + return; + } + if ( a == 0.5 && b == 0.5 ) { + *derivative = ONE_OVER_PI * stdlib_base_sqrt( y * x ); + // We have an arcsine distribution: + p = ( upper ) ? stdlib_base_asin( stdlib_base_sqrt( y ) ) : stdlib_base_asin( stdlib_base_sqrt( x ) ); + p /= STDLIB_CONSTANT_FLOAT64_HALF_PI; + if ( !regularized ) { + p *= STDLIB_CONSTANT_FLOAT64_PI; + } + *out = p; + return; + } + if ( a == 1.0 ) { + tmp = b; + b = a; + a = tmp; + tmp = y; + y = x; + x = tmp; + upper = !upper; + } + if ( b == 1.0 ) { + // Special case see: http://functions.wolfram.com/GammaBetaErf/BetaRegularized/03/01/01/ + if ( a == 1.0 ) { + *out = ( upper ) ? y : x; + *derivative = 1.0; + return; + } + *derivative = a * stdlib_base_pow( x, a - 1.0 ); + if ( y < 0.5 ) { + p = ( upper ) ? -stdlib_base_expm1( a * stdlib_base_log1p( -y ) ) : stdlib_base_exp( a * stdlib_base_log1p( -y ) ); + } else { + p = ( upper ) ? -( stdlib_base_pow( x, a ) - 1.0 ) : stdlib_base_pow( x, a ); + } + if ( !regularized ) { + p /= a; + } + *out = p; + return; + } + if ( stdlib_base_min( a, b ) <= 1.0 ) { + if ( x > 0.5 ) { + tmp = b; + b = a; + a = tmp; + tmp = y; + y = x; + x = tmp; + upper = !upper; + } + if ( stdlib_base_max( a, b ) <= 1.0 ) { + // Both a,b < 1: + if ( ( a >= stdlib_base_min( 0.2, b ) ) || ( stdlib_base_pow( x, a ) <= 0.9 ) ) { + if ( upper ) { + fract = -( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -ibetaSeries( a, b, x, fract, regularized, derivative, y ); + } else { + fract = ibetaSeries( a, b, x, 0, regularized, derivative, y ); + } + } else { + tmp = b; + b = a; + a = tmp; + tmp = y; + y = x; + x = tmp; + upper = !upper; + if ( y >= 0.3 ) { + if ( upper ) { + fract = -( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -ibetaSeries( a, b, x, fract, regularized, derivative, y ); + } else { + fract = ibetaSeries( a, b, x, 0, regularized, derivative, y ); + } + } else { + // Sidestep on a, and then use the series representation: + if ( regularized ) { + prefix = 1; + } else { + prefix = risingFactorialRatio( a + b, a, 20 ); + } + fract = ibetaAStep( a, b, x, y, 20, regularized, derivative ); + if ( upper ) { + fract -= ( ( regularized ) ? 1 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -betaSmallBLargeASeries( a + 20.0, b, x, y, fract, prefix, regularized ); + } else { + fract = betaSmallBLargeASeries( a + 20.0, b, x, y, fract, prefix, regularized ); + } + } + } + } else if ( b <= 1.0 || ( x < 0.1 && ( stdlib_base_pow( b * x, a ) <= 0.7 ) ) ) { + if ( upper ) { + fract = -( ( regularized ) ? 1 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -ibetaSeries( a, b, x, fract, regularized, derivative, y ); + } else { + fract = ibetaSeries( a, b, x, 0.0, regularized, derivative, y ); + } + } else { + tmp = b; + b = a; + a = tmp; + tmp = y; + y = x; + x = tmp; + upper = !upper; + if ( y >= 0.3 ) { + if ( upper ) { + fract = -( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -ibetaSeries( a, b, x, fract, regularized, derivative, y ); + } else { + fract = ibetaSeries( a, b, x, 0.0, regularized, derivative, y ); + } + } else if ( a >= 15.0 ) { + if ( upper ) { + fract = -( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -betaSmallBLargeASeries( a, b, x, y, fract, 1.0, regularized ); + } else { + fract = betaSmallBLargeASeries( a, b, x, y, 0.0, 1.0, regularized ); + } + } else { + if ( regularized ) { + prefix = 1; + } else { + // Sidestep to improve errors: + prefix = risingFactorialRatio( a + b, a, 20.0 ); + } + fract = ibetaAStep( a, b, x, y, 20.0, regularized, derivative ); + if ( upper ) { + fract -= ( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -betaSmallBLargeASeries( a + 20.0, b, x, y, fract, prefix, regularized ); + } else { + fract = betaSmallBLargeASeries( a + 20.0, b, x, y, fract, prefix, regularized ); + } + } + } + } else { + // Both a,b >= 1: + if ( a < b ) { + lambda = a - ( ( a + b ) * x ); + } else { + lambda = ( ( a + b ) * y ) - b; + } + if ( lambda < 0.0 ) { + tmp = b; + b = a; + a = tmp; + tmp = y; + y = x; + x = tmp; + upper = !upper; + } + if ( b < 40.0 ) { + if ( stdlib_base_floor( a ) == a && stdlib_base_floor( b ) == b && a < STDLIB_CONSTANT_INT32_MAX - 100 ) { + // Relate to the binomial distribution and use a finite sum: + k = a - 1.0; + n = b + k; + fract = binomialCCDF( n, k, x, y ); + if ( !regularized ) { + fract *= stdlib_base_beta( a, b ); + } + } else if ( b * x <= 0.7 ) { + if ( upper ) { + fract = -( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ); + upper = false; + fract = -ibetaSeries( a, b, x, fract, regularized, derivative, y ); + } else { + fract = ibetaSeries( a, b, x, 0.0, regularized, derivative, y ); + } + } else if ( a > 15.0 ) { + // Sidestep so we can use the series representation: + n = stdlib_base_floor( b ); + if ( n == b ) { + n -= 1; + } + bbar = b - n; + if ( regularized ) { + prefix = 1; + } else { + prefix = risingFactorialRatio( a + bbar, bbar, n ); + } + fract = ibetaAStep( bbar, a, y, x, n, regularized, NULL ); + fract = betaSmallBLargeASeries( a, bbar, x, y, fract, 1.0, regularized ); + fract /= prefix; + } else if ( regularized ) { + n = stdlib_base_floor( b ); + bbar = b - n; + if ( bbar <= 0 ) { + n -= 1; + bbar += 1; + } + fract = ibetaAStep( bbar, a, y, x, n, regularized, NULL ); + fract += ibetaAStep( a, bbar, x, y, 20.0, regularized, NULL ); + if ( upper ) { + fract -= 1; + } + fract = betaSmallBLargeASeries( a + 20.0, bbar, x, y, fract, 1, regularized ); + if ( upper ) { + fract = -fract; + upper = false; + } + } else { + fract = ibetaFraction2( a, b, x, y, regularized, derivative ); + } + } else { + fract = ibetaFraction2( a, b, x, y, regularized, derivative ); + } + } + if ( *derivative < 0.0 ) { + *derivative = ibetaPowerTerms( a, b, x, y, true ); + } + div = y * x; + if ( *derivative != 0.0 ) { + if ( STDLIB_CONSTANT_FLOAT64_MAX * div < *derivative ) { + // Overflow, return an arbitrarily large value: + *derivative = STDLIB_CONSTANT_FLOAT64_MAX / 2.0; + } else { + *derivative /= div; + } + } + *out = ( upper ) ? ( ( regularized ) ? 1.0 : stdlib_base_beta( a, b ) ) - fract : fract; + return; +} From cb0ae548c5480f6c994ec4f8a44fba475a80d188 Mon Sep 17 00:00:00 2001 From: stdlib-bot <82920195+stdlib-bot@users.noreply.github.com> Date: Sat, 14 Feb 2026 20:00:43 +0000 Subject: [PATCH 2/4] chore: update copyright years --- .../@stdlib/math/base/special/kernel-betainc/lib/native.js | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js index 4af69edca88a..ce936dc5e3d5 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/lib/native.js @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2026 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. From a988da14ede67788f2aa3c77008b9fd48df0e3ea Mon Sep 17 00:00:00 2001 From: nirmaljb Date: Sun, 15 Feb 2026 01:39:46 +0530 Subject: [PATCH 3/4] fix: removed trailing whitespace --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: missing_dependencies - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../math/base/special/kernel-betainc/examples/c/example.c | 1 - 1 file changed, 1 deletion(-) diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c index 17420cfdbae4..1e3bfdefb149 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/examples/c/example.c @@ -31,7 +31,6 @@ int main( void ) { double a; double b; struct BasePRNGObject *obj = stdlib_base_random_randu_allocate( 0 ); - for ( i = 0; i < 100; i++ ) { x = stdlib_base_random_randu( obj ); a = stdlib_base_random_randu( obj ) * 10.0; From 9607505f45b4dd73643233937ca78a4e1e712401 Mon Sep 17 00:00:00 2001 From: nirmaljb Date: Sun, 15 Feb 2026 01:57:13 +0530 Subject: [PATCH 4/4] fix: removed unnecessary assigned variable --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: passed - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../@stdlib/math/base/special/kernel-betainc/src/main.c | 1 - 1 file changed, 1 deletion(-) diff --git a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c index 89548b1adb04..755c78e00595 100644 --- a/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c +++ b/lib/node_modules/@stdlib/math/base/special/kernel-betainc/src/main.c @@ -468,7 +468,6 @@ static double betaSmallBLargeASeries( const double a, const double b, const doub // Begin by evaluating the next Pn from Eq 9.4: tnp1 += 2.0; p[ n ] = 0.0; - mbn = b - n; tmp1 = 3; for ( m = 1; m < n; ++m ) { mbn = ( m * b ) - n;